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Species belonging to selected taxon:
Carica papaya
ABOUT THIS RECORD
ID:
MNEST046339
species:
Carica papaya
source:
microPC, original name:
miR390
Taxonomy by NCBI:
Carica papaya
Carica
Caricaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGCTCAGGAGGGATAGC
miRNA*
TATCCATCCTGAGTTT
mismatches:
1
bulges:
0
View larger
pre-miRNA
AAGCTCAGGAGGGATAGC
GCCATGGCGGGTCTTGAATCTTGATCTTCATTTGCGC
TATCCATCCTGAGTTT
dot-bracket secondary structure
((((((((((.(((((((
((.((((.(((((.........)))))))))..))))
))))).))))))))))
SIMILARITIES
miRBase
gma-MIR390a
:
0.000000003
PMRD
ath-miR390b
:
0.00000005
microPC
miR390
:
7e-35
UniProt
no hits
RFAM
MIR390: 1e-33
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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